Miyakogusa Predicted Gene

Lj5g3v1498020.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NJ17_SOYBN 516 87.3 91.2 (tr|I1NJ17) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G05545.1 268 53.9 66.1 | Symbols: | RING/U-box superfamily protein | chr3:1609436-1612133 FORWARD LENGTH=425
Medicago Medtr1g083390.1 501 84.5 89.4 | DNA-binding protein, putative | HC | chr1:37109750-37117337 | 20130731
Soybean Glyma20g38050.1 516 87.3 91.2  
LJGI gnl|LJGI|TC72319 973 98.8 98.8 homologue to UniRef100_A7PS18 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (68%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1498020.1 length: 309 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 5.3e-11 29-76
HMMSmart SM00184 Ring 6.7e-07 30-74
ProfileScan PS50089 ZF_RING_2 12.076 30-75
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2e-10 28-77
no_ID  
HMMPanther PTHR22764 RING 3.2e-76 13-221
HMMPanther PTHR22764:SF50 PROTEIN 3.2e-76 13-221
Seg seg seg NA 4-26
271-283
superfamily SSF57850 RING/U-box 1.5e-12 23-96
Wolf-PSORT
Lj5g3v1498020.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1498020.1