Miyakogusa Predicted Gene

Lj5g3v1496810.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LBB0_SOYBN 584 86.1 91.6 (tr|I1LBB0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G34910.1 446 70.9 84.8 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:16631661-16634834 FORWARD LENGTH=626
Medicago Medtr1g083130.1 558 80.9 86.7 | DEAD-box ATP-dependent RNA helicase | HC | chr1:37010922-37003111 | 20130731
Soybean Glyma10g29360.1 584 86.1 91.6  
LJGI gnl|LJGI|BW598039 785 97.7 97.7 similar to UniRef100_A7R1V5 Cluster: Chromosome chr7 scaffold_382, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_382, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1496810.1 length: 345 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 1.1e-09 298-339
ProfileScan PS51194 HELICASE_CTER 7.646 266-345
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 9.9e-37 49-226
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 1.1e-42 44-257
ProfileScan PS51192 HELICASE_ATP_BIND_1 24.901 56-237
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 12.272 25-53
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 8.8e-17 5-240
248-339
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2e-17 12-248
250-339
HMMPanther PTHR24031 FAMILY 3.1e-161 3-338
HMMPanther PTHR24031:SF96 LOC553462 3.1e-161 3-338
Wolf-PSORT
Lj5g3v1496810.1	cyto 9, pero 2, chlo 1, nucl 1, mito 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1496810.1