Miyakogusa Predicted Gene

Lj5g3v1473470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SQH5_LOTJA 431 83.1 83.1 (tr|I3SQH5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G54830.3 216 54.2 57.9 | Symbols: NF-YC3 | nuclear factor Y, subunit C3 | chr1:20451672-20452325 FORWARD LENGTH=217
Medicago Medtr7g113680.1 360 69.6 73.5 | nuclear transcription factor Y protein | HC | chr7:46853507-46850661 | 20130731
Soybean Glyma19g42460.1 355 68.5 73.5  
LJGI gnl|LJGI|TC76130 624 99.7 99.7 similar to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y; n=1; Medicago truncatula|Rep: Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula (Barrel medic), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1473470.1 length: 260 aa.
IPR003958 Transcription factor CBF/NF-Y/archaeal histone
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00808 CBFD_NFYB_HMF 5.3e-22 101-164
IPR009072 Histone-fold
Molecular Function GO:0046982 protein heterodimerization activity    
Gene3D G3DSA:1.10.20.10 no description 7.2e-37 93-165
superfamily SSF47113 Histone-fold 1.3e-33 23-174
IPR027170 Transcriptional activator NFYC/HAP5 subunit
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Cellular Component GO:0016602 CCAAT-binding factor complex    
HMMPanther PTHR10252:SF6 CCAAT-BINDING 7.9e-76 66-238
no_ID  
HMMPanther PTHR10252 HISTONE-LIKE 7.9e-76 66-238
Seg seg seg NA 62-89
188-203
Wolf-PSORT
Lj5g3v1473470.1	nucl 12, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1473470.1