Miyakogusa Predicted Gene

Lj5g3v1452280.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C0JP34_LOTJA 469 94.2 94.2 (tr|C0JP34) Putative basic helix-loop-helix protein BHLH26 (Fragment) OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT1G72210.1 243 59.2 75.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:27180066-27182268 FORWARD LENGTH=320
Medicago Medtr1g082480.1 348 70.6 78.8 | basic helix loop helix (BHLH) DNA-binding family protein | HC | chr1:36677044-36674657 | 20130731
Soybean Glyma20g37550.1 386 79.4 85.8  
LJGI gnl|LJGI|TC75292 535 100.0 100.0 similar to UniRef100_Q2HTN6 Cluster: Helix-loop-helix DNA-binding; n=1; Medicago truncatula|Rep: Helix-loop-helix DNA-binding - Medicago truncatula (Barrel medic), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1452280.1 length: 242 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 2.7e-13 40-97
HMMPfam PF00010 HLH 1.7e-10 42-93
HMMSmart SM00353 helix 1.3e-09 47-98
ProfileScan PS50888 BHLH 15.421 41-92
superfamily SSF47459 HLH, 3.1e-16 39-125
no_ID  
HMMPanther PTHR32088 FAMILY 8.6e-119 6-241
HMMPanther PTHR32088:SF0 SUBFAMILY 8.6e-119 6-241
Seg seg seg NA 21-34
Wolf-PSORT
Lj5g3v1452280.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1452280.1