Miyakogusa Predicted Gene
- Lj5g3v1425440.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S1W2_LOTJA |
259 |
91.0 |
91.0 |
(tr|I3S1W2) Ribosomal protein L34 OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G13882.1 |
128 |
53.2 |
63.9 |
| Symbols: | Ribosomal protein L34 | chr3:4574600-4575852 FORWARD LENGTH=147 |
| Medicago |
Medtr8g017420.1 |
159 |
59.9 |
71.4 |
| ribosomal protein L34 | HC | chr8:5907605-5911187 | 20130731 |
| Soybean |
Glyma08g20450.1 |
132 |
71.9 |
79.2 |
|
| LJGI |
gnl|LJGI|TC63996 |
868 |
100.0 |
100.0 |
similar to UniRef100_Q6ZZ86 Cluster: 50S ribosomal protein L34; n=1; Cicer arietinum|Rep: 50S ribosomal protein L34 - Cicer arietinum (Chickpea) (Garbanzo), partial (87%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1425440.1 |
length: 145 aa. |
| IPR000271 |
Ribosomal protein L34 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003735 |
structural constituent of ribosome |
|
|
| Cellular Component |
GO:0005622 |
intracellular |
|
|
| Cellular Component |
GO:0005840 |
ribosome |
|
|
| Biological Process |
GO:0006412 |
translation |
|
|
| BlastProDom |
PD003101 |
Q8LR04_ORYSA_Q8LR04; |
4e-11 |
103-140 |
| HAMAP |
MF_00391 |
Ribosomal_L34 |
13.197 |
102-145 |
| HMMPanther |
PTHR14503 |
FAMILY |
4.2e-21 |
96-145 |
| HMMPfam |
PF00468 |
Ribosomal_L34 |
3.1e-18 |
103-145 |
| HMMTigr |
TIGR01030 |
rpmH_bact: |
1.5e-15 |
103-145 |
| no_ID |
|
| HMMPanther |
PTHR14503:SF0 |
SUBFAMILY |
4.2e-21 |
96-145 |
| Seg |
seg |
seg |
NA |
23-35 |
- Wolf-PSORT
Lj5g3v1425440.1 nucl 9, mito 2, chlo 1, plas 1, cysk 1, cyto_mito 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1425440.1 |
|