Miyakogusa Predicted Gene

Lj5g3v1414150.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL C6T2H8_SOYBN 308 71.3 78.5 (tr|C6T2H8) Uncharacterized protein OS=Glycine max PE=2 SV=1

TAIR_pep AT4G14746.1 114 41.0 53.2 | Symbols: | CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr4:8462720-8464326 REVERSE LENGTH=212

Medicago Medtr1g080990.2 307 70.3 79.9 | MtN26 | HC | chr1:36062765-36060795 | 20130731

Soybean Glyma10g30340.1 308 71.3 78.5

LJGI gnl|LJGI|TC61341 1249 100.0 100.0 weakly similar to UniRef100_A7NWT1 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1414150.1 length: 209 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 6-18
171-182

Wolf-PSORT

Lj5g3v1414150.1 extr 8, chlo 3, vacu 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1414150.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	C6T2H8_SOYBN	308	71.3	78.5	(tr\|C6T2H8) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep	AT4G14746.1	114	41.0	53.2	\| Symbols: \| CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). \| chr4:8462720-8464326 REVERSE LENGTH=212
Medicago	Medtr1g080990.2	307	70.3	79.9	\| MtN26 \| HC \| chr1:36062765-36060795 \| 20130731
Soybean	Glyma10g30340.1	308	71.3	78.5
LJGI	gnl\|LJGI\|TC61341	1249	100.0	100.0	weakly similar to UniRef100_A7NWT1 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)

no_ID
Lj5g3v1414150.1				length: 209 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	6-18 171-182