Miyakogusa Predicted Gene

Lj5g3v1412970.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C0JP10_LOTJA 419 65.8 65.8 (tr|C0JP10) Putative basic helix-loop-helix protein BHLH2 OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G02590.2 199 60.0 68.9 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:1137968-1140306 REVERSE LENGTH=310
Medicago Medtr1g080890.1 310 52.1 56.9 | transcription factor UNE12-like protein | HC | chr1:36000358-35993128 | 20130731
Soybean Glyma20g36770.1 286 52.6 55.9  
LJGI gnl|LJGI|TC59454 1927 98.2 98.2 similar to UniRef100_A7Q620 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (79%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1412970.2 length: 342 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10G3DSA:4.10.280.10 T[188-246] 4.69999999961346E-14  
HMMPfam PF00010 HLH 3.100000000000002E-6 191-235
HMMSmart SM00353 HLH 3.899998617952183E-12 192-241
ProfileScan PS50888 BHLH 0.0 186-235
superfamily SSF47459 HLH_basic 6.20000124972815E-15 184-268
no_ID  
HMMPanther PTHR16223 PTHR16223 1.0999918447140527E-97 156-339
HMMPanther PTHR16223:SF1 PTHR16223:SF1 1.0999918447140527E-97 156-339
Wolf-PSORT
Lj5g3v1412970.2	nucl 12, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1412970.2