Miyakogusa Predicted Gene

Lj5g3v1381580.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LBM9_SOYBN 119 85.5 92.8 (tr|I1LBM9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G30620.1 95.9 70.6 82.4 | Symbols: | winged-helix DNA-binding transcription factor family protein | chr2:13045360-13046267 FORWARD LENGTH=273
Medicago Medtr1g080700.1 117 85.5 91.3 | linker histone H1 and h5 family protein | HC | chr1:35890649-35889690 | 20130731
Soybean Glyma10g30560.1 119 85.5 92.8  
LJGI gnl|LJGI|TC66437 630 100.0 100.0 similar to UniRef100_O65758 Cluster: Histone H1; n=1; Cicer arietinum|Rep: Histone H1 - Cicer arietinum (Chickpea) (Garbanzo), partial (66%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1381580.2 length: 197 aa.
IPR005818 Histone H1/H5
method AccNumber shortName E-value location
Cellular Component GO:0000786 nucleosome    
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006334 nucleosome assembly    
HMMPfam PF00538 Linker_histone 1.8e-22 16-84
HMMSmart SM00526 Domain 4.6e-33 14-80
ProfileScan PS51504 H15 30.941 16-85
IPR005819 Histone H5
Cellular Component GO:0000786 nucleosome    
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006334 nucleosome assembly    
FPrintScan PR00624 HISTONEH5 3.4e-13 3-24
30-47
111-125
149-166
171-190
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 4.4e-24 12-89
no_ID  
HMMPanther PTHR11467 HISTONE 1.9e-26 4-197
HMMPanther PTHR11467:SF0 SUBFAMILY 1.9e-26 4-197
Seg seg seg NA 2-14
84-197
superfamily SSF46785 "Winged 5.9e-24 11-92
Wolf-PSORT
Lj5g3v1381580.2	nucl 11, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1381580.2