Miyakogusa Predicted Gene

Lj5g3v1358160.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I6U2_MEDTR 822 57.4 64.4 (tr|G7I6U2) Transcriptional regulator ATRX OS=Medicago truncatula GN=MTR_1g080420 PE=4 SV=1
TAIR_pep AT1G08600.2 482 73.3 79.8 | Symbols: ATRX | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:2724562-2733431 FORWARD LENGTH=1479
Medicago Medtr1g080420.1 1090 68.2 74.5 | chromatin remodeling complex subunit | HC | chr1:35761109-35726804 | 20130731
Soybean Glyma20g37100.1 566 83.4 86.8  
LJGI gnl|LJGI|BP042574 666 99.4 99.4 similar to UniRef100_Q9FRS5 Cluster: F22O13.8; n=1; Arabidopsis thaliana|Rep: F22O13.8 - Arabidopsis thaliana (Mouse-ear cress), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1358160.1 length: 833 aa.
IPR000330 SNF2-related
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00176 SNF2_N 9.7e-43 609-822
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 2.1e-21 602-822
ProfileScan PS51192 HELICASE_ATP_BIND_1 16.224 628-811
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.3e-50 595-821
no_ID  
Coil coil coiled-coil NA 49-77
107-135
Gene3D G3DSA:3.40.50.300 no description 2.2e-14 599-807
HMMPanther PTHR10799 SWI/SNF-RELATED 2e-185 5-822
HMMPanther PTHR10799:SF135ATP BINDING 2e-185 5-822
Seg seg seg NA 52-61
63-76
267-277
325-339
446-457
474-500
507-520
528-539
Wolf-PSORT
Lj5g3v1358160.1	nucl 12, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1358160.1