Miyakogusa Predicted Gene

Lj5g3v1355060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N504_SOYBN 890 74.1 84.2 (tr|K7N504) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G08610.1 559 53.6 71.3 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:2733788-2735467 REVERSE LENGTH=559
Medicago Medtr1g080120.2 742 65.6 77.0 | PPR containing plant-like protein | HC | chr1:35583141-35579895 | 20130731
Soybean Glyma20g36550.1 822 77.1 86.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1355060.1 length: 575 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.83 155-183
505-534
541-567
HMMPfam PF12854 PPR_1 1.9e-05 322-342
HMMPfam PF13041 PPR_2 5e-13 186-232
361-410
431-479
HMMTigr TIGR00756 PPR: 5.4e-06 155-188
189-223
224-256
329-361
364-398
399-431
434-468
505-538
ProfileScan PS51375 PPR 8.550 117-151
152-186
187-221
222-256
257-291
292-326
362-396
327-361
397-431
432-466
467-501
502-536
537-571
no_ID  
Coil coil coiled-coil NA 481-502
HMMPanther PTHR24015 FAMILY 6.9e-121 114-566
HMMPanther PTHR24015:SF0 SUBFAMILY 6.9e-121 114-566
Wolf-PSORT
Lj5g3v1355060.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1355060.1