Miyakogusa Predicted Gene
- Lj5g3v1351990.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JTT9_MEDTR |
420 |
90.0 |
95.0 |
(tr|G7JTT9) Dihydroorotase OS=Medicago truncatula GN=MTR_4g078370 PE=3 SV=1 |
| TAIR_pep |
AT4G22930.1 |
384 |
79.0 |
91.8 |
| Symbols: PYR4, DHOASE | pyrimidin 4 | chr4:12019315-12021200 FORWARD LENGTH=377 |
| Medicago |
Medtr4g078370.1 |
420 |
90.0 |
95.0 |
| dihydroorotase | HC | chr4:30209873-30203784 | 20130731 |
| Soybean |
Glyma06g44630.1 |
419 |
90.4 |
95.0 |
|
| LJGI |
gnl|LJGI|TC60686 |
1233 |
98.3 |
98.3 |
similar to UniRef100_A5JJV0 Cluster: Mitochondrial dihydroorotase; n=1; Vicia faba|Rep: Mitochondrial dihydroorotase - Vicia faba (Broad bean), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1351990.1 |
length: 221 aa. |
| IPR002195 |
Dihydroorotase, conserved site |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016812 |
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides |
|
|
| PatternScan |
PS00483 |
DIHYDROOROTASE_2 |
NA |
121-132 |
| IPR006680 |
Amidohydrolase 1 |
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| HMMPfam |
PF01979 |
Amidohydro_1 |
5.6e-16 |
1-210 |
| no_ID |
|
| Gene3D |
G3DSA:3.20.20.140 |
no description |
5.8e-81 |
1-217 |
| HMMPanther |
PTHR32531 |
FAMILY |
1.5e-152 |
1-221 |
| HMMPanther |
PTHR32531:SF2 |
SUBFAMILY |
1.5e-152 |
1-221 |
| superfamily |
SSF51556 |
Metallo-dependent |
4.2e-89 |
1-219 |
- Wolf-PSORT
Lj5g3v1351990.1 cyto 8, nucl 2, chlo 1, extr 1, cysk 1, nucl_plas 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1351990.1 |
Not targeted |
-56.100 |
-0.023 |
-16.129 |
84.05% |
-39.948
|