Miyakogusa Predicted Gene

Lj5g3v1330840.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1NIM1_SOYBN 581 85.0 90.7 (tr|I1NIM1) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G04560.1 437 64.7 76.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 16 growth stages; Has 227 Blast hits to 225 proteins in 83 species: Archae - 0; Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51; Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink). | chr3:1227506-1229338 REVERSE LENGTH=417

Medicago Medtr1g079830.1 565 73.2 80.8 | hypothetical protein | HC | chr1:35470780-35473560 | 20130731

Soybean Glyma20g36470.1 581 85.0 90.7

LJGI gnl|LJGI|TC68170 1229 97.8 97.8 similar to UniRef100_A7QMS2 Cluster: Chromosome undetermined scaffold_127, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_127, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1330840.1 length: 391 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 9-40

Wolf-PSORT

Lj5g3v1330840.1 chlo 4, nucl 4, cyto 3, mito 1, plas 1, pero 1, mito_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1330840.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1NIM1_SOYBN	581	85.0	90.7	(tr\|I1NIM1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G04560.1	437	64.7	76.1	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 16 growth stages; Has 227 Blast hits to 225 proteins in 83 species: Archae - 0; Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51; Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink). \| chr3:1227506-1229338 REVERSE LENGTH=417
Medicago	Medtr1g079830.1	565	73.2	80.8	\| hypothetical protein \| HC \| chr1:35470780-35473560 \| 20130731
Soybean	Glyma20g36470.1	581	85.0	90.7
LJGI	gnl\|LJGI\|TC68170	1229	97.8	97.8	similar to UniRef100_A7QMS2 Cluster: Chromosome undetermined scaffold_127, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_127, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)

no_ID
Lj5g3v1330840.1				length: 391 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	9-40