Miyakogusa Predicted Gene

Lj5g3v1328770.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JRT7_SOYBN 70.5 35.7 42.9 (tr|I1JRT7) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep --No_Hits--

Medicago Medtr7g116320.3 54.7 38.2 44.9 | AT hook motif DNA-binding family protein | HC | chr7:47961408-47966056 | 20130731

Soybean Glyma03g41230.2 70.5 35.7 42.9

LJGI gnl|LJGI|FS332711 396 99.5 99.5

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1328770.1 length: 121 aa.

IPR017956 AT hook, DNA-binding motif

method AccNumber shortName E-value location

Molecular Function GO:0003677 DNA binding

HMMPfam PF02178 AT_hook 0.012 48-59

no_ID

Seg seg seg NA 15-28
63-82

Wolf-PSORT

Lj5g3v1328770.1 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1328770.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JRT7_SOYBN	70.5	35.7	42.9	(tr\|I1JRT7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	--No_Hits--
Medicago	Medtr7g116320.3	54.7	38.2	44.9	\| AT hook motif DNA-binding family protein \| HC \| chr7:47961408-47966056 \| 20130731
Soybean	Glyma03g41230.2	70.5	35.7	42.9
LJGI	gnl\|LJGI\|FS332711	396	99.5	99.5

IPR017956	AT hook, DNA-binding motif
Lj5g3v1328770.1				length: 121 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003677	DNA binding
HMMPfam	PF02178	AT_hook	0.012	48-59
no_ID
Seg	seg	seg	NA	15-28 63-82