Miyakogusa Predicted Gene
- Lj5g3v1326710.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S7X8_LOTJA |
506 |
100.0 |
100.0 |
(tr|I3S7X8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G12590.1 |
454 |
88.2 |
94.3 |
| Symbols: | Protein of unknown function DUF106, transmembrane | chr4:7451291-7452976 REVERSE LENGTH=246 |
| Medicago |
Medtr1g079890.1 |
469 |
91.9 |
95.5 |
| ER membrane protein complex subunit-like protein | HC | chr1:35485633-35490893 | 20130731 |
| Soybean |
Glyma08g44410.2 |
485 |
94.3 |
97.6 |
|
| LJGI |
gnl|LJGI|TC57170 |
1453 |
99.9 |
99.9 |
similar to UniRef100_A9SYV3 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (95%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1326710.1 |
length: 246 aa. |
| IPR002809 |
Protein of unknown function DUF106, transmembrane |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF01956 |
DUF106 |
2.4e-53 |
4-192 |
| IPR008568 |
Uncharacterised conserved protein UCP010045, transmembrane eukaryotic |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPIR |
PIRSF010045 |
Transmembrane |
7.7e-118 |
1-246 |
| HMMPanther |
PTHR13116 |
UNCHARACTERIZED |
7.3e-116 |
1-241 |
- Wolf-PSORT
Lj5g3v1326710.1 plas 2.5, E.R._plas 2.5, chlo 2, nucl 2, cyto 2, mito 2, extr 2, cyto_nucl 2, chlo_mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1326710.1 |
|