Miyakogusa Predicted Gene

Lj5g3v1315650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I669_MEDTR 1205 94.2 97.2 (tr|G7I669) Vacuolar protein sorting-associated protein-like protein OS=Medicago truncatula GN=MTR_1g079770 PE=4 SV=1
TAIR_pep AT1G71270.1 1072 83.5 91.8 | Symbols: POK, TTD8, ATVPS52 | Vps52 / Sac2 family | chr1:26863736-26869817 FORWARD LENGTH=707
Medicago Medtr1g079770.1 1205 94.2 97.2 | vacuolar protein sorting-associated protein | HC | chr1:35431318-35442002 | 20130731
Soybean Glyma19g43870.1 1149 90.9 95.2  
LJGI gnl|LJGI|BI417275 1221 98.9 98.9 similar to UniRef100_A7P2R4 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1315650.1 length: 617 aa.
IPR007258 Vps52/Sac2
method AccNumber shortName E-value location
HMMPanther PTHR14190 SUPPRESSOR 0 15-617
HMMPfam PF04129 Vps52 3.6e-208 77-579
no_ID  
Coil coil coiled-coil NA 174-195
HMMPanther PTHR14190:SF6 ARE1-LIKE 0 15-617
Wolf-PSORT
Lj5g3v1315650.1	cyto 8, chlo 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1315650.1