Miyakogusa Predicted Gene

Lj5g3v1314600.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LJV1_SOYBN 359 90.2 92.8 (tr|K7LJV1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G38890.1 285 71.4 84.7 | Symbols: | Nucleic acid-binding, OB-fold-like protein | chr5:15569507-15570898 FORWARD LENGTH=191
Medicago Medtr1g079767.1 338 83.3 91.1 | nucleic acid-binding, OB-fold-like protein | HC | chr1:35428282-35424462 | 20130731
Soybean Glyma20g36410.1 189 61.5 68.0  
LJGI gnl|LJGI|TC72205 1029 100.0 100.0 similar to UniRef100_A7PZ33 Cluster: Chromosome chr4 scaffold_39, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_39, whole genome shotgun sequence - Vitis vinifera (Grape), partial (83%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1314600.1 length: 196 aa.
IPR003029 Ribosomal protein S1, RNA-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
ProfileScan PS50126 S1 8.592 75-154
IPR019495 Exosome complex component CSL4
Cellular Component GO:0000178 exosome (RNase complex)    
Molecular Function GO:0003723 RNA binding    
HMMPfam PF10447 EXOSC1 9.3e-25 71-142
IPR025721 Exosome complex component, N-terminal domain
HMMPfam PF14382 ECR1_N 6.7e-13 8-47
no_ID  
HMMPanther PTHR12686 3'-5' 1.7e-90 1-194
HMMPanther PTHR12686:SF8 SUBFAMILY 1.7e-90 1-194
Wolf-PSORT
Lj5g3v1314600.1	chlo 8, nucl 3, cyto 3, cyto_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1314600.1