Miyakogusa Predicted Gene

Lj5g3v1303370.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LBT1_SOYBN 1394 76.8 83.3 (tr|I1LBT1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G04260.1 927 79.7 88.0 | Symbols: PTAC3 | plastid transcriptionally active 3 | chr3:1123231-1127515 REVERSE LENGTH=910
Medicago Medtr1g079525.1 1358 77.2 83.8 | plastid transcriptionally active protein | HC | chr1:35351898-35342752 | 20130731
Soybean Glyma20g36340.1 1384 77.4 83.3  
LJGI gnl|LJGI|TC76540 56.0 100.0 100.0 similar to UniRef100_A7PPW7 Cluster: Chromosome chr18 scaffold_24, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_24, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1303370.1 length: 893 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13812 PPR_3 0.12 240-268
277-309
IPR003034 SAP domain
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:1.10.720.30 no description 1.4e-06 531-565
HMMPfam PF02037 SAP 4.1e-08 531-563
HMMSmart SM00513 Putative 5.9e-09 530-564
ProfileScan PS50800 SAP 10.206 530-564
no_ID  
Coil coil coiled-coil NA 646-674
HMMPanther PTHR24015 FAMILY 5.1e-218 66-518
HMMPanther PTHR24015:SF181SUBFAMILY NOT 5.1e-218 66-518
Seg seg seg NA 8-17
475-489
576-589
633-676
721-725
850-856
superfamily SSF68906 SAP 2.2e-07 526-569
Wolf-PSORT
Lj5g3v1303370.1	chlo 9, mito 3.5, cyto_mito 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1303370.1