Miyakogusa Predicted Gene

Lj5g3v1302290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T458_LOTJA 345 79.9 79.9 (tr|I3T458) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G02250.1 161 41.8 54.0 | Symbols: AtPP2-B2, PP2-B2 | phloem protein 2-B2 | chr2:594655-595825 REVERSE LENGTH=310
Medicago Medtr1g079140.1 233 53.3 63.1 | F-box protein | HC | chr1:35183912-35181812 | 20130731
Soybean Glyma20g36230.1 258 60.9 68.0  
LJGI gnl|LJGI|TC59528 1318 99.9 99.9 weakly similar to UniRef100_A7QZ06 Cluster: Chromosome undetermined scaffold_261, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_261, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1302290.1 length: 223 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 5.1e-06 4-47
HMMSmart SM00256 A 0.0019 7-47
ProfileScan PS50181 FBOX 10.213 1-47
superfamily SSF81383 F-box 2.4e-08 4-60
IPR025886 Phloem protein 2-like
HMMPfam PF14299 PP2 8.3e-43 100-205
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 2.2e-07 4-76
HMMPanther PTHR32278 FAMILY 2.8e-93 4-206
HMMPanther PTHR32278:SF0 SUBFAMILY 2.8e-93 4-206
Seg seg seg NA 31-42
54-82
Wolf-PSORT
Lj5g3v1302290.1	cyto 8, chlo 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1302290.1