Miyakogusa Predicted Gene

Lj5g3v1265040.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N4Y4_SOYBN 2000 78.8 86.7 (tr|K7N4Y4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G08620.2 1226 54.0 66.9 | Symbols: PKDM7D | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein | chr1:2737554-2743370 FORWARD LENGTH=1209
Medicago Medtr1g078070.1 1860 74.2 82.3 | transcription factor jumonji family protein | HC | chr1:34930614-34920281 | 20130731
Soybean Glyma20g36070.1 1851 74.3 81.5  
LJGI gnl|LJGI|TC58947 2311 100.0 100.0 similar to UniRef100_A7QMV3 Cluster: Chromosome chr14 scaffold_128, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_128, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1265040.1 length: 1257 aa.
IPR003347 JmjC domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF02373 JmjC 3.7e-46 394-510
HMMSmart SM00558 A 5.9e-70 364-527
ProfileScan PS51184 JMJC 40.935 364-527
IPR003349 Transcription factor jumonji, JmjN
HMMPfam PF02375 JmjN 1.5e-17 154-187
HMMSmart SM00545 Small 1.7e-22 152-193
ProfileScan PS51183 JMJN 18.054 153-194
IPR003888 FY-rich, N-terminal
Cellular Component GO:0005634 nucleus    
HMMPfam PF05964 FYRN 7.6e-08 1040-1084
HMMSmart SM00541 "FY-rich" 1.8e-14 1041-1085
ProfileScan PS51542 FYRN 23.845 1027-1085
IPR003889 FY-rich, C-terminal
Cellular Component GO:0005634 nucleus    
HMMPfam PF05965 FYRC 1.5e-20 1090-1176
HMMSmart SM00542 "FY-rich" 5.5e-31 1091-1185
ProfileScan PS51543 FYRC 24.714 1087-1177
IPR004198 Zinc finger, C5HC2-type
Cellular Component GO:0005634 nucleus    
HMMPfam PF02928 zf-C5HC2 1.6e-14 617-670
no_ID  
HMMPanther PTHR10694 JUMONJI 2.8e-207 134-684
HMMPanther PTHR10694:SF8 RETINOBLASTOMA 2.8e-207 134-684
Seg seg seg NA 711-721
superfamily SSF51197 Clavaminate 4.1e-42 353-555
Wolf-PSORT
Lj5g3v1265040.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1265040.1