Miyakogusa Predicted Gene

Lj5g3v1264020.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M2V0_SOYBN 1144 69.0 73.8 (tr|I1M2V0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G10390.2 753 49.7 61.5 | Symbols: | Nucleoporin autopeptidase | chr1:3407265-3412045 REVERSE LENGTH=1041
Medicago Medtr1g078040.2 1070 65.8 71.0 | nucleoporin autopeptidase | HC | chr1:34898558-34890792 | 20130731
Soybean Glyma13g33910.1 1144 69.0 73.8  
LJGI gnl|LJGI|BW595532 932 99.8 99.8 similar to UniRef100_A7QJ03 Cluster: Chromosome chr2 scaffold_105, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_105, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1264020.1 length: 1020 aa.
IPR007230 Peptidase S59, nucleoporin
method AccNumber shortName E-value location
Cellular Component GO:0005643 nuclear pore    
Biological Process GO:0006810 transport    
HMMPfam PF04096 Nucleoporin2 1.3e-41 864-1004
ProfileScan PS51434 NUP_C 51.361 862-1004
superfamily SSF82215 C-terminal 1.1e-49 853-1011
no_ID  
Gene3D G3DSA:3.30.1610.10 no description 3.7e-52 858-1010
HMMPanther PTHR23198 NUCLEOPORIN 3.2e-208 2-1013
Seg seg seg NA 7-25
49-63
68-115
215-242
286-298
324-342
443-475
591-607
611-629
Wolf-PSORT
Lj5g3v1264020.1	chlo 9, nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1264020.1