Miyakogusa Predicted Gene

Lj5g3v1260880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NIH9_SOYBN 962 83.9 89.9 (tr|I1NIH9) Ubiquitin carboxyl-terminal hydrolase OS=Glycine max PE=3 SV=2
TAIR_pep AT4G10570.1 694 62.6 76.9 | Symbols: UBP9 | ubiquitin-specific protease 9 | chr4:6523657-6528058 REVERSE LENGTH=923
Medicago Medtr1g077980.1 931 82.9 89.8 | ubiquitin carboxyl-terminal hydrolase-like protein | HC | chr1:34854787-34865759 | 20130731
Soybean Glyma20g36020.1 954 82.4 88.4  
LJGI gnl|LJGI|AV776416 549 97.2 97.2 weakly similar to UniRef100_A7QJ40 Cluster: Ubiquitin carboxyl-terminal hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin carboxyl-terminal hydrolase - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1260880.1 length: 545 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 1.8e-46 197-368
ProfileScan PS50235 UCH_2_3 17.547 199-531
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00972 UCH_2_1 NA 200-215
no_ID  
Gene3D G3DSA:3.30.2230.10 no description 6.5e-06 7-41
HMMPanther PTHR24006 FAMILY 8.3e-208 1-477
HMMPanther PTHR24006:SF24 SUBFAMILY 8.3e-208 1-477
Seg seg seg NA 117-134
superfamily SSF54001 Cysteine 2.3e-52 195-379
Wolf-PSORT
Lj5g3v1260880.1	nucl 10, cyto 2, vacu 1, pero 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1260880.1