Miyakogusa Predicted Gene

Lj5g3v1236780.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B3IX44_LOTJA 462 87.3 87.3 (tr|B3IX44) Transcription factor C2C2-Dof OS=Lotus japonicus GN=Dof-M153 PE=2 SV=1
TAIR_pep AT4G24060.1 167 41.4 51.5 | Symbols: | Dof-type zinc finger DNA-binding family protein | chr4:12503970-12505417 FORWARD LENGTH=342
Medicago Medtr1g077600.2 243 55.2 63.7 | Dof-type zinc finger DNA-binding family protein | HC | chr1:34645345-34648290 | 20130731
Soybean Glyma20g35910.1 263 53.3 61.3  
LJGI gnl|LJGI|TC67936 1061 99.8 99.8 similar to UniRef100_A7QU31 Cluster: Chromosome chr2 scaffold_176, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_176, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1236780.1 length: 286 aa.
IPR003851 Zinc finger, Dof-type
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
BlastProDom PD007478 Q8RVK0_HORVU_Q8RVK0; 3e-29 34-98
HMMPfam PF02701 zf-Dof 1.1e-36 40-100
PatternScan PS01361 ZF_DOF_1 NA 46-82
ProfileScan PS50884 ZF_DOF_2 28.435 44-98
no_ID  
HMMPanther PTHR31992 FAMILY 1.4e-46 25-152
HMMPanther PTHR31992:SF0 SUBFAMILY 1.4e-46 25-152
Seg seg seg NA 153-185
272-285
Wolf-PSORT
Lj5g3v1236780.1	nucl 12, chlo 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1236780.1