Miyakogusa Predicted Gene

Lj5g3v1236750.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T4D8_LOTJA 286 89.4 89.4 (tr|I3T4D8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G05070.1 144 52.9 64.1 | Symbols: | CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink). | chr3:1416480-1417533 FORWARD LENGTH=144
Medicago Medtr1g077570.1 192 62.7 72.8 | cwf18 pre-mRNA splicing factor | HC | chr1:34618361-34621579 | 20130731
Soybean Glyma20g35890.1 182 65.6 71.9  
LJGI gnl|LJGI|TC60256 944 99.6 99.6 similar to UniRef100_A7PAX9 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (62%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1236750.1 length: 160 aa.
IPR013169 mRNA splicing factor, Cwf18
method AccNumber shortName E-value location
HMMPfam PF08315 cwf18 1.2e-28 7-142
no_ID  
Coil coil coiled-coil NA 118-139
HMMPanther PTHR31551 FAMILY 6.2e-19 1-148
HMMPanther PTHR31551:SF0 SUBFAMILY 6.2e-19 1-148
Seg seg seg NA 13-29
Wolf-PSORT
Lj5g3v1236750.1	mito 8, nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1236750.1