Miyakogusa Predicted Gene

Lj5g3v1222610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LC11_SOYBN 1152 80.6 88.6 (tr|I1LC11) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G33420.1 631 49.6 66.0 | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr1:12121063-12123346 REVERSE LENGTH=697
Medicago Medtr1g076990.1 1125 79.2 87.2 | PHD finger plant-like protein | HC | chr1:34353455-34359940 | 20130731
Soybean Glyma10g31980.1 1152 80.6 88.6  
LJGI gnl|LJGI|BW632492 938 100.0 100.0 similar to UniRef100_A7QR23 Cluster: Chromosome undetermined scaffold_147, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_147, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1222610.1 length: 699 aa.
IPR001965 Zinc finger, PHD-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 2.2e-05 610-656
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 3.3e-13 593-664
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.1e-12 605-660
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 1.2e-07 611-657
IPR020549 Endoribonuclease YbeY, conserved site
PatternScan PS01306 UPF0054 NA 165-175
no_ID  
HMMPanther PTHR15856 PHD 1.3e-137 38-655
HMMPanther PTHR15856:SF14 SUBFAMILY 1.3e-137 38-655
Seg seg seg NA 261-272
Wolf-PSORT
Lj5g3v1222610.1	chlo 10, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1222610.1