Miyakogusa Predicted Gene

Lj5g3v1208460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LC19_SOYBN 650 74.8 84.6 (tr|I1LC19) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G20860.1 321 38.8 60.2 | Symbols: | FAD-binding Berberine family protein | chr4:11172726-11174318 FORWARD LENGTH=530
Medicago Medtr1g076830.1 629 73.9 83.6 | FAD-binding berberine family protein | HC | chr1:34296146-34297881 | 20130731
Soybean Glyma10g32070.1 650 74.8 84.6  
LJGI gnl|LJGI|GO028240 1655 99.8 99.8 similar to UniRef100_A7Q7R0 Cluster: Chromosome chr18 scaffold_61, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_61, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1208460.1 length: 418 aa.
IPR006094 FAD linked oxidase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01565 FAD_binding_4 1.6e-16 2-86
IPR012951 Berberine/berberine-like
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08031 BBE 6.5e-22 341-404
IPR016166 FAD-binding, type 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51387 FAD_PCMH 13.215 1-120
superfamily SSF56176 FAD-binding 2.9e-28 1-121
IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Gene3D G3DSA:3.30.465.10 no description 1.9e-10 7-120
no_ID  
HMMPanther PTHR32448 FAMILY 2e-153 1-411
Seg seg seg NA 48-60
101-105
Wolf-PSORT
Lj5g3v1208460.1	cyto 6, cysk 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1208460.1