Miyakogusa Predicted Gene
- Lj5g3v1208440.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7L6C0_MEDTR |
636 |
83.8 |
89.7 |
(tr|G7L6C0) F-box protein OS=Medicago truncatula GN=MTR_7g034720 PE=4 SV=1 |
| TAIR_pep |
AT1G33290.1 |
543 |
78.9 |
90.1 |
| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:12074125-12075989 FORWARD LENGTH=379 |
| Medicago |
Medtr1g076810.1 |
636 |
83.8 |
89.7 |
| P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr1:34287503-34293448 | 20130731 |
| Soybean |
Glyma20g35550.1 |
632 |
90.5 |
95.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1208440.1 |
length: 386 aa. |
| IPR003593 |
AAA+ ATPase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0000166 |
nucleotide binding |
|
|
| Molecular Function |
GO:0017111 |
nucleoside-triphosphatase activity |
|
|
| HMMSmart |
SM00382 |
ATPases |
9.1e-14 |
170-326 |
| IPR003959 |
ATPase, AAA-type, core |
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| HMMPfam |
PF00004 |
AAA |
1.2e-06 |
174-265 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
3.8e-20 |
65-316 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
1.3e-17 |
169-295 |
| HMMPanther |
PTHR31173 |
FAMILY |
2.9e-158 |
51-377 |
| Seg |
seg |
seg |
NA |
33-47 |
- Wolf-PSORT
Lj5g3v1208440.1 chlo 6, cyto 3, nucl 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1208440.1 |
|