Miyakogusa Predicted Gene

Lj5g3v1208330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NIC3_SOYBN 409 66.9 71.8 (tr|I1NIC3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G62260.1 196 55.6 70.0 | Symbols: | AT hook motif DNA-binding family protein | chr5:25009331-25011348 FORWARD LENGTH=404
Medicago Medtr1g076710.1 377 61.9 67.8 | AT hook motif DNA-binding family protein | HC | chr1:34240906-34245813 | 20130731
Soybean Glyma20g35480.1 409 66.9 71.8  
LJGI gnl|LJGI|TC64716 1501 100.0 100.0 similar to UniRef100_A7QGT6 Cluster: Chromosome chr16 scaffold_94, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_94, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1208330.1 length: 343 aa.
IPR005175 Domain of unknown function DUF296
method AccNumber shortName E-value location
HMMPfam PF03479 DUF296 3.1e-43 138-254
IPR017956 AT hook, DNA-binding motif
Molecular Function GO:0003677 DNA binding    
HMMPfam PF02178 AT_hook 1.8 50-61
97-104
HMMSmart SM00384 DNA 9.9 50-62
97-109
no_ID  
Gene3D G3DSA:3.30.1330.80 no description 4.4e-33 138-261
HMMPanther PTHR31500 FAMILY 1.6e-94 29-275
HMMPanther PTHR31500:SF0 SUBFAMILY 1.6e-94 29-275
Seg seg seg NA 50-64
69-75
77-89
118-127
233-244
superfamily SSF117856 AF0104/ALDC/Ptd012-like 1.4e-33 132-276
Wolf-PSORT
Lj5g3v1208330.1	nucl 5, chlo 3, mito 2, plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1208330.1