Miyakogusa Predicted Gene

Lj5g3v1208090.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL B9HKC1_POPTR 559 78.6 85.6 (tr|B9HKC1) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832825 PE=4 SV=1

TAIR_pep AT3G63410.1 473 69.1 77.1 | Symbols: APG1, VTE3, IEP37, E37 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:23415816-23417002 REVERSE LENGTH=338

Medicago Medtr1g076570.1 598 84.1 89.4 | 2-methyl-6-phytylbenzoquinone methyltranferase | HC | chr1:34140386-34137655 | 20130731

Soybean Glyma02g00440.1 533 76.1 83.6

LJGI gnl|LJGI|TC65976 662 100.0 100.0 similar to UniRef100_A7NWX5 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (47%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1208090.1 length: 340 aa.

IPR013216 Methyltransferase type 11

method AccNumber shortName E-value location

Biological Process GO:0008152 metabolic process

Molecular Function GO:0008168 methyltransferase activity

HMMPfam PF08241 Methyltransf_11 1.1e-17 118-213

no_ID

Gene3D G3DSA:3.40.50.150 no description 1.1e-36 87-262

HMMPanther PTHR10108 METHYLTRANSFERASE 7.3e-197 57-340

HMMPanther PTHR10108:SF9 CHLOROPLAST 7.3e-197 57-340

Seg seg seg NA 121-130
150-163

superfamily SSF53335 S-adenosyl-L-methionine-dependent 4.7e-40 66-280

Wolf-PSORT

Lj5g3v1208090.1 chlo 10, mito 1, extr 1, vacu 1, E.R. 1, E.R._vacu 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1208090.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	B9HKC1_POPTR	559	78.6	85.6	(tr\|B9HKC1) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832825 PE=4 SV=1
TAIR_pep	AT3G63410.1	473	69.1	77.1	\| Symbols: APG1, VTE3, IEP37, E37 \| S-adenosyl-L-methionine-dependent methyltransferases superfamily protein \| chr3:23415816-23417002 REVERSE LENGTH=338
Medicago	Medtr1g076570.1	598	84.1	89.4	\| 2-methyl-6-phytylbenzoquinone methyltranferase \| HC \| chr1:34140386-34137655 \| 20130731
Soybean	Glyma02g00440.1	533	76.1	83.6
LJGI	gnl\|LJGI\|TC65976	662	100.0	100.0	similar to UniRef100_A7NWX5 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (47%)

IPR013216	Methyltransferase type 11
Lj5g3v1208090.1				length: 340 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0008152	metabolic process
Molecular Function	GO:0008168	methyltransferase activity
HMMPfam	PF08241	Methyltransf_11	1.1e-17	118-213
no_ID
Gene3D	G3DSA:3.40.50.150	no description	1.1e-36	87-262
HMMPanther	PTHR10108	METHYLTRANSFERASE	7.3e-197	57-340
HMMPanther	PTHR10108:SF9	CHLOROPLAST	7.3e-197	57-340
Seg	seg	seg	NA	121-130 150-163
superfamily	SSF53335	S-adenosyl-L-methionine-dependent	4.7e-40	66-280