Miyakogusa Predicted Gene

Lj5g3v1175630.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7LK68_SOYBN 655 80.7 87.4 (tr|K7LK68) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G28600.1 340 47.2 66.8 | Symbols: NPGR2 | no pollen germination related 2 | chr4:14130046-14132599 FORWARD LENGTH=739
Medicago Medtr1g075480.4 616 74.9 86.3 | TPR 7B-like protein | HC | chr1:33430899-33426787 | 20130731
Soybean Glyma10g32710.1 654 80.7 87.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1175630.2 length: 398 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.6e-24 108-390
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 18.760 253-392
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.0056 4-37
161-194
253-286
287-320
ProfileScan PS50005 TPR 11.623 253-286
287-320
no_ID  
Coil coil coiled-coil NA 199-220
HMMPanther PTHR23083 TETRATRICOPEPTIDE 1.3e-126 5-398
HMMPanther PTHR23083:SF163SUBFAMILY NOT 1.3e-126 5-398
HMMPfam PF13414 TPR_11 7.8e-07 254-318
Seg seg seg NA 24-38
superfamily SSF48452 TPR-like 1.5e-05 243-377
5-220
Wolf-PSORT
Lj5g3v1175630.2	chlo 4, extr 4, E.R. 2, nucl 1, cyto 1, mito 1, plas 1, cyto_nucl 1, nucl_plas 1, E.R._vacu 1, mito_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1175630.2