Miyakogusa Predicted Gene

Lj5g3v1174300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I3Z1_MEDTR 357 80.2 88.0 (tr|G7I3Z1) DNA repair protein XRCC4 OS=Medicago truncatula GN=MTR_1g075330 PE=4 SV=1
TAIR_pep AT3G23100.2 270 61.2 76.6 | Symbols: XRCC4 | homolog of human DNA ligase iv-binding protein XRCC4 | chr3:8220721-8221991 FORWARD LENGTH=264
Medicago Medtr1g075330.1 357 80.2 88.0 | DNA-repair protein XRCC4, putative | HC | chr1:33351200-33355764 | 20130731
Soybean Glyma10g32840.1 332 65.9 74.1  
LJGI gnl|LJGI|TC71441 858 99.8 99.8 similar to UniRef100_A7NX21 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1174300.1 length: 260 aa.
IPR009089 DNA double-strand break repair and VJ recombination XRCC4, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006302 double-strand break repair    
Biological Process GO:0006310 DNA recombination    
Gene3D G3DSA:2.170.210.10 no description 7.3e-05 17-86
IPR010585 DNA repair protein XRCC4
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006302 double-strand break repair    
Biological Process GO:0006310 DNA recombination    
HMMPfam PF06632 XRCC4 1.8e-21 22-242
IPR014751 DNA repair protein XRCC4, C-terminal
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006302 double-strand break repair    
Biological Process GO:0006310 DNA recombination    
Gene3D G3DSA:1.20.5.370 no description 3.7e-20 121-210
no_ID  
Coil coil coiled-coil NA 183-204
Seg seg seg NA 218-243
Wolf-PSORT
Lj5g3v1174300.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1174300.1