Miyakogusa Predicted Gene

Lj5g3v1172180.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N4Q3_SOYBN 937 68.6 74.8 (tr|K7N4Q3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G23070.1 612 49.2 63.1 | Symbols: ATCFM3A, CFM3A | CRM family member 3A | chr3:8203548-8207243 FORWARD LENGTH=881
Medicago Medtr1g475240.1 905 66.6 74.2 | CRS1/YhbY (CRM) domain protein | HC | chr1:33263693-33269751 | 20130731
Soybean Glyma20g34730.1 918 73.0 79.2  
LJGI gnl|LJGI|BP063860 591 99.0 99.0 similar to UniRef100_A7NX06 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1172180.2 length: 681 aa.
IPR001890 RNA-binding, CRM domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Gene3D G3DSA:3.30.110.60 no description 4.3e-25 191-283
436-527
HMMPfam PF01985 CRS1_YhbY 6.1e-17 195-275
439-520
HMMSmart SM01103 no description 2.2e-10 192-275
436-520
ProfileScan PS51295 CRM 8.018 190-286
434-531
647-681
superfamily SSF75471 YhbY-like 2.6e-05 190-287
434-532
647-681
no_ID  
Coil coil coiled-coil NA 529-550
609-637
HMMPanther PTHR31846 FAMILY 1.4e-220 16-681
HMMPanther PTHR31846:SF0 SUBFAMILY 1.4e-220 16-681
Seg seg seg NA 70-91
187-204
331-346
Wolf-PSORT
Lj5g3v1172180.2	chlo 7, nucl 5, plas 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1172180.2