Miyakogusa Predicted Gene

Lj5g3v1172180.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N4Q3_SOYBN 1160 71.6 78.5 (tr|K7N4Q3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G23070.1 803 52.9 66.8 | Symbols: ATCFM3A, CFM3A | CRM family member 3A | chr3:8203548-8207243 FORWARD LENGTH=881
Medicago Medtr1g475240.1 1120 69.2 77.4 | CRS1/YhbY (CRM) domain protein | HC | chr1:33263693-33269751 | 20130731
Soybean Glyma20g34730.1 1090 75.6 81.6  
LJGI gnl|LJGI|BP063860 591 99.0 99.0 similar to UniRef100_A7NX06 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1172180.1 length: 846 aa.
IPR001890 RNA-binding, CRM domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Gene3D G3DSA:3.30.110.60 no description 4.5e-22 245-337
490-581
702-800
HMMPfam PF01985 CRS1_YhbY 2.8e-21 249-329
493-574
703-790
HMMSmart SM01103 no description 2e-22 246-329
490-574
703-790
ProfileScan PS51295 CRM 19.990 244-340
488-585
701-801
superfamily SSF75471 YhbY-like 3.2e-18 701-802
244-341
488-586
no_ID  
Coil coil coiled-coil NA 583-604
663-691
HMMPanther PTHR31846 FAMILY 1e-290 99-843
HMMPanther PTHR31846:SF0 SUBFAMILY 1e-290 99-843
Seg seg seg NA 124-145
241-258
385-400
Wolf-PSORT
Lj5g3v1172180.1	chlo 11, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1172180.1