Miyakogusa Predicted Gene
- Lj5g3v1145290.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S6Z0_LOTJA |
503 |
99.6 |
99.6 |
(tr|I3S6Z0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G43430.1 |
415 |
78.9 |
90.8 |
| Symbols: ETFBETA | electron transfer flavoprotein beta | chr5:17453656-17455111 FORWARD LENGTH=251 |
| Medicago |
Medtr1g074170.1 |
471 |
91.6 |
96.8 |
| electron transfer flavoprotein subunit beta | HC | chr1:32959781-32955577 | 20130731 |
| Soybean |
Glyma10g33110.1 |
483 |
94.8 |
97.2 |
|
| LJGI |
gnl|LJGI|TC66081 |
1499 |
100.0 |
100.0 |
similar to UniRef100_A7NX80 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1145290.1 |
length: 251 aa. |
| IPR000049 |
Electron transfer flavoprotein, beta-subunit, conserved site |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0009055 |
electron carrier activity |
|
|
| PatternScan |
PS01065 |
ETF_BETA |
NA |
157-177 |
| IPR012255 |
Electron transfer flavoprotein, beta subunit |
| Molecular Function |
GO:0009055 |
electron carrier activity |
|
|
| HMMPIR |
PIRSF000090 |
Electron |
5e-108 |
1-250 |
| HMMPanther |
PTHR21294 |
ELECTRON |
1.8e-132 |
1-251 |
| IPR014729 |
Rossmann-like alpha/beta/alpha sandwich fold |
| Gene3D |
G3DSA:3.40.50.620 |
no description |
1.3e-101 |
1-246 |
| IPR014730 |
Electron transfer flavoprotein, alpha/beta-subunit, N-terminal |
| HMMPfam |
PF01012 |
ETF |
2.6e-35 |
26-185 |
| HMMSmart |
SM00893 |
Electron |
5e-65 |
23-213 |
| no_ID |
|
| HMMPanther |
PTHR21294:SF0 |
SUBFAMILY |
1.8e-132 |
1-251 |
| superfamily |
SSF52402 |
Adenine |
4.7e-94 |
1-244 |
- Wolf-PSORT
Lj5g3v1145290.1 cyto 7, plas 3, chlo 2, nucl 1.5, cysk_nucl 1.5, golg_plas 1.5, E.R._plas 1.5, mito_plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1145290.1 |
|