Miyakogusa Predicted Gene
- Lj5g3v1145260.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5X4E3_PRUPE |
502 |
42.5 |
58.9 |
(tr|M5X4E3) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023156mg PE=4 SV=1 |
| TAIR_pep |
AT3G42170.1 |
254 |
27.7 |
44.0 |
| Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696 |
| Medicago |
Medtr4g036325.1 |
95.1 |
49.5 |
67.7 |
| hypothetical protein | LC | chr4:13081348-13082899 | 20130731 |
| Soybean |
Glyma09g15130.2 |
316 |
30.0 |
48.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1145260.1 |
length: 660 aa. |
| IPR008906 |
HAT dimerisation |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0046983 |
protein dimerization activity |
|
|
| HMMPfam |
PF05699 |
Dimer_Tnp_hAT |
2.2e-23 |
560-644 |
| IPR012337 |
Ribonuclease H-like domain |
| Molecular Function |
GO:0003676 |
nucleic acid binding |
|
|
| superfamily |
SSF53098 |
Ribonuclease |
2.6e-77 |
158-649 |
| IPR025525 |
Domain of unknown function DUF4413 |
| HMMPfam |
PF14372 |
DUF4413 |
2.4e-26 |
411-510 |
| no_ID |
|
| HMMPanther |
PTHR10775 |
UNCHARACTERIZED |
3.6e-107 |
99-644 |
| HMMPanther |
PTHR10775:SF11 |
SUBFAMILY |
3.6e-107 |
99-644 |
| Seg |
seg |
seg |
NA |
510-534 |
- Wolf-PSORT
Lj5g3v1145260.1 nucl 9, cyto 2, vacu 1, pero 1, golg 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1145260.1 |
|