Miyakogusa Predicted Gene

Lj5g3v1145220.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7N4P4_SOYBN 402 58.7 67.7 (tr|K7N4P4) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G43990.1 91.7 28.3 42.0 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; Has 1419 Blast hits to 494 proteins in 144 species: Archae - 0; Bacteria - 300; Metazoa - 246; Fungi - 102; Plants - 31; Viruses - 2; Other Eukaryotes - 738 (source: NCBI BLink). | chr2:18211974-18213872 FORWARD LENGTH=632

Medicago Medtr1g073930.1 304 55.8 63.8 | hypothetical protein | HC | chr1:32853967-32857458 | 20130731

Soybean Glyma10g33160.1 406 64.0 71.7

LJGI gnl|LJGI|TC78299 583 100.0 100.0 similar to UniRef100_A7QB14 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1145220.1 length: 382 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 7-21
63-78
258-270

Wolf-PSORT

Lj5g3v1145220.1 nucl 11, chlo 1, cyto 1, cysk 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1145220.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7N4P4_SOYBN	402	58.7	67.7	(tr\|K7N4P4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G43990.1	91.7	28.3	42.0	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; Has 1419 Blast hits to 494 proteins in 144 species: Archae - 0; Bacteria - 300; Metazoa - 246; Fungi - 102; Plants - 31; Viruses - 2; Other Eukaryotes - 738 (source: NCBI BLink). \| chr2:18211974-18213872 FORWARD LENGTH=632
Medicago	Medtr1g073930.1	304	55.8	63.8	\| hypothetical protein \| HC \| chr1:32853967-32857458 \| 20130731
Soybean	Glyma10g33160.1	406	64.0	71.7
LJGI	gnl\|LJGI\|TC78299	583	100.0	100.0	similar to UniRef100_A7QB14 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)

no_ID
Lj5g3v1145220.1				length: 382 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	7-21 63-78 258-270