Miyakogusa Predicted Gene

Lj5g3v1118470.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7LZC4_SOYBN 180 43.9 50.2 (tr|K7LZC4) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G44040.1 94.4 33.3 43.0 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:17719896-17721348 REVERSE LENGTH=416

Medicago Medtr1g069610.1 210 44.2 50.2 | hypothetical protein | HC | chr1:30263456-30261145 | 20130731

Soybean Glyma13g18770.3 178 41.9 49.8

LJGI gnl|LJGI|TC76860 1279 99.8 99.8 similar to UniRef100_A7Q1N2 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1118470.1 length: 271 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 45-60
103-120
132-143
147-166

Wolf-PSORT

Lj5g3v1118470.1 nucl 10, chlo 1, mito 1, cysk 1, chlo_mito 1, golg_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1118470.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7LZC4_SOYBN	180	43.9	50.2	(tr\|K7LZC4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G44040.1	94.4	33.3	43.0	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). \| chr5:17719896-17721348 REVERSE LENGTH=416
Medicago	Medtr1g069610.1	210	44.2	50.2	\| hypothetical protein \| HC \| chr1:30263456-30261145 \| 20130731
Soybean	Glyma13g18770.3	178	41.9	49.8
LJGI	gnl\|LJGI\|TC76860	1279	99.8	99.8	similar to UniRef100_A7Q1N2 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)

no_ID
Lj5g3v1118470.1				length: 271 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	45-60 103-120 132-143 147-166