Miyakogusa Predicted Gene

Lj5g3v1118430.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L8G5_SOYBN 1150 80.2 87.2 (tr|I1L8G5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G28600.1 763 57.1 71.7 | Symbols: NPGR2 | no pollen germination related 2 | chr4:14130046-14132599 FORWARD LENGTH=739
Medicago Medtr1g069630.1 1122 78.0 86.1 | TPR 7B-like protein | HC | chr1:30287455-30283113 | 20130731
Soybean Glyma10g04500.1 1150 80.2 87.2  
LJGI gnl|LJGI|BW595163 944 99.6 99.6 weakly similar to UniRef100_A7Q1P5 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1118430.1 length: 713 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 5.3e-05 608-634
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5.3e-29 418-706
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 16.469 440-544
567-707
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 56 133-166
440-473
475-508
511-544
567-600
601-634
671-707
ProfileScan PS50005 TPR 10.738 567-600
601-634
no_ID  
HMMPanther PTHR23083 TETRATRICOPEPTIDE 3.6e-199 158-713
HMMPanther PTHR23083:SF163SUBFAMILY NOT 3.6e-199 158-713
Seg seg seg NA 258-272
545-556
superfamily SSF48452 TPR-like 3.1e-08 509-689
436-539
Wolf-PSORT
Lj5g3v1118430.1	nucl 6, cyto 4, cysk_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1118430.1