Miyakogusa Predicted Gene

Lj5g3v1118370.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5HIG2_9FABA 807 95.2 97.9 (tr|A5HIG2) Succinyl-CoA ligase beta subunit OS=Caragana jubata PE=1 SV=1
TAIR_pep AT2G20420.1 753 87.1 94.5 | Symbols: | ATP citrate lyase (ACL) family protein | chr2:8805574-8807858 FORWARD LENGTH=421
Medicago Medtr1g069645.1 802 94.5 96.7 | succinyl-CoA ligase [ADP-forming] subunit beta | HC | chr1:30310532-30316207 | 20130731
Soybean Glyma13g18730.1 797 93.6 96.4  
LJGI gnl|LJGI|TC61761 2516 100.0 100.0 homologue to UniRef100_A5HIG2 Cluster: Succinyl-CoA ligase beta subunit; n=1; Caragana jubata|Rep: Succinyl-CoA ligase beta subunit - Caragana jubata, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1118370.1 length: 422 aa.
IPR005809 Succinyl-CoA synthetase, beta subunit
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPanther PTHR11815 SUCCINYL-COA 3.7e-229 21-422
HMMTigr TIGR01016 sucCoAbeta: 9.2e-133 29-420
IPR005811 ATP-citrate lyase/succinyl-CoA ligase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00549 Ligase_CoA 3e-27 297-417
IPR011761 ATP-grasp fold
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0046872 metal ion binding    
ProfileScan PS50975 ATP_GRASP 9.799 36-262
IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type
HMMPfam PF08442 ATP-grasp_2 6e-61 29-237
IPR013815 ATP-grasp fold, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.1490.20 no description 8.2e-24 49-129
IPR013816 ATP-grasp fold, subdomain 2
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.470.20 no description 1.3e-53 130-274
IPR016102 Succinyl-CoA synthetase-like
Gene3D G3DSA:3.40.50.261 no description 1.7e-63 275-418
superfamily SSF52210 Succinyl-CoA 1e-53 274-421
IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site
PatternScan PS01217 SUCCINYL_COA_LIG_3 NA 292-316
no_ID  
HMMPanther PTHR11815:SF0 SUBFAMILY 3.7e-229 21-422
superfamily SSF56059 Glutathione 4.5e-72 27-273
Wolf-PSORT
Lj5g3v1118370.1	mito 11, chlo 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1118370.1