Miyakogusa Predicted Gene

Lj5g3v1118330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LHB7_SOYBN 771 85.4 92.5 (tr|K7LHB7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G28550.1 590 65.2 78.7 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr4:14111204-14113468 FORWARD LENGTH=424
Medicago Medtr1g069705.2 752 82.0 92.9 | Ypt/Rab-GAP domain of gyp1p superfamily protein | HC | chr1:30360034-30352916 | 20130731
Soybean Glyma13g18700.2 758 86.2 93.2  
LJGI gnl|LJGI|GO036174 1411 99.9 99.9 similar to UniRef100_A7Q1Q5 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1118330.1 length: 424 aa.
IPR000195 Rab-GTPase-TBC domain
method AccNumber shortName E-value location
Molecular Function GO:0005097 Rab GTPase activator activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0032313 regulation of Rab GTPase activity    
HMMPfam PF00566 RabGAP-TBC 1.1e-35 160-312
HMMSmart SM00164 Domain 8.8e-33 72-336
ProfileScan PS50086 TBC_RABGAP 35.306 75-313
superfamily SSF47923 Ypt/Rab-GAP 7.6e-29 44-273
248-417
no_ID  
Gene3D G3DSA:1.10.8.270 no description 2.1e-28 161-236
HMMPanther PTHR22957 TBC1 1e-196 19-422
HMMPanther PTHR22957:SF30 GTPASE 1e-196 19-422
Wolf-PSORT
Lj5g3v1118330.1	chlo 9, cyto 3, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1118330.1