Miyakogusa Predicted Gene

Lj5g3v1073940.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7MYP8_SOYBN 1087 70.8 78.8 (tr|K7MYP8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G54790.1 656 48.6 63.4 | Symbols: | ARM repeat superfamily protein | chr3:20281830-20284363 REVERSE LENGTH=760
Medicago Medtr1g069845.3 1069 70.3 76.3 | armadillo/beta-catenin repeat protein | HC | chr1:30528750-30523135 | 20130731
Soybean Glyma19g34820.1 989 66.8 74.3  
LJGI gnl|LJGI|TC80044 2458 99.9 99.9 weakly similar to UniRef100_A7Q1S3 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1073940.1 length: 789 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00514 Arm 1.5e-05 535-572
575-613
618-654
HMMSmart SM00185 Armadillo/beta-catenin-like 15 533-573
574-614
615-655
656-695
696-736
ProfileScan PS50176 ARM_REPEAT 12.337 544-586
585-627
626-668
667-708
IPR003613 U box domain
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 2.3e-24 241-312
HMMSmart SM00504 Modified 2.2e-27 244-307
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.6e-67 503-776
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 6.5e-30 240-312
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 7.3e-47 503-776
no_ID  
Coil coil coiled-coil NA 196-217
HMMPanther PTHR23315 BETA 8.2e-254 7-774
HMMPanther PTHR23315:SF35 ARMADILLO/BETA-CATENIN 8.2e-254 7-774
Seg seg seg NA 122-133
342-353
395-406
470-479
superfamily SSF57850 RING/U-box 3.5e-25 240-314
Wolf-PSORT
Lj5g3v1073940.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1073940.1