Miyakogusa Predicted Gene

Lj5g3v1073870.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L8E3_SOYBN 886 75.5 80.9 (tr|I1L8E3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G54670.1 678 58.2 72.2 | Symbols: TTN8, SMC1, ATSMC1 | Structural maintenance of chromosomes (SMC) family protein | chr3:20235818-20243701 FORWARD LENGTH=1238
Medicago Medtr1g069910.1 855 72.2 80.3 | structural maintenance of chromosomes protein | HC | chr1:30581189-30595745 | 20130731
Soybean Glyma13g18470.1 887 75.5 80.9  
LJGI gnl|LJGI|TC73196 1160 100.0 100.0 similar to UniRef100_A7Q1S8 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1073870.2 length: 594 aa.
IPR003395 RecF/RecN/SMC
method AccNumber shortName E-value location
HMMPfam PF02463 SMC_N 9.6e-23 10-172
IPR010935 SMCs flexible hinge
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005694 chromosome    
Biological Process GO:0051276 chromosome organization    
HMMPfam PF06470 SMC_hinge 3.5e-16 517-585
HMMSmart SM00968 SMC 2.6e-14 517-593
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1e-38 8-525
no_ID  
Coil coil coiled-coil NA 170-191
198-232
307-370
412-440
454-503
Gene3D G3DSA:3.40.50.300 no description 9.5e-38 324-346
HMMPanther PTHR18937 STRUCTURAL 1.6e-216 1-593
HMMPanther PTHR18937:SF12 STRUCTURAL 1.6e-216 1-593
Seg seg seg NA 181-190
204-217
245-256
269-285
320-337
369-379
Wolf-PSORT
Lj5g3v1073870.2	cyto 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1073870.2