Miyakogusa Predicted Gene

Lj5g3v1062500.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LYJ0_SOYBN 847 71.0 77.1 (tr|I1LYJ0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G31240.1 647 62.3 75.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:13317570-13319518 REVERSE LENGTH=617
Medicago Medtr1g070145.1 838 72.2 79.0 | kinesin light chain, putative | HC | chr1:30817766-30814274 | 20130731
Soybean Glyma13g18310.1 847 71.0 77.1  
LJGI gnl|LJGI|TC61239 1243 100.0 100.0 similar to UniRef100_A7QVT2 Cluster: Chromosome chr7 scaffold_192, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_192, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1062500.1 length: 619 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 6e-05 108-298
299-499
500-580
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 9.732 200-233
403-519
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 1.3e+02 152-185
200-233
242-275
362-395
403-436
444-477
486-519
528-561
ProfileScan PS50005 TPR 6.048 200-233
403-436
486-519
no_ID  
Coil coil coiled-coil NA 562-590
HMMPanther PTHR19959 KINESIN 1.2e-149 184-579
HMMPanther PTHR19959:SF78 SUBFAMILY 1.2e-149 184-579
HMMPfam PF13424 TPR_12 5.3e-09 200-271
453-515
Seg seg seg NA 10-29
77-87
130-147
424-436
565-586
superfamily SSF48452 TPR-like 2.9e-10 258-476
433-585
130-305
Wolf-PSORT
Lj5g3v1062500.1	chlo 12, nucl 1, plas 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1062500.1