Miyakogusa Predicted Gene

Lj5g3v1027080.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LH76_SOYBN 688 66.2 70.6 (tr|K7LH76) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1
TAIR_pep AT3G04610.1 413 53.4 63.9 | Symbols: FLK | RNA-binding KH domain-containing protein | chr3:1250762-1254272 REVERSE LENGTH=577
Medicago Medtr1g070380.1 658 63.6 69.4 | poly(rC)-binding-like protein | HC | chr1:31149691-31143604 | 20130731
Soybean Glyma10g03910.1 687 66.2 70.6  
LJGI gnl|LJGI|TC58201 1382 100.0 100.0 similar to UniRef100_A7QMQ0 Cluster: Chromosome undetermined scaffold_127, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_127, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1027080.1 length: 550 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 1.9e-10 147-217
237-312
423-493
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 1.4e-12 151-201
241-307
427-488
ProfileScan PS50084 KH_TYPE_1 15.053 148-215
238-307
424-488
no_ID  
Coil coil coiled-coil NA 481-502
Gene3D G3DSA:3.30.1370.10 no description 1.5e-16 140-203
237-313
421-495
HMMPanther PTHR10288 KH 5.3e-95 107-506
HMMPanther PTHR10288:SF53 KH 5.3e-95 107-506
Seg seg seg NA 42-60
330-368
524-542
superfamily SSF54791 Eukaryotic 3.8e-14 411-494
135-203
225-346
Wolf-PSORT
Lj5g3v1027080.1	cyto 8, nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1027080.1