Miyakogusa Predicted Gene

Lj5g3v1015870.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SNQ1_LOTJA 307 100.0 100.0 (tr|I3SNQ1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G04270.1 268 93.4 97.4 | Symbols: RPS15 | cytosolic ribosomal protein S15 | chr1:1141852-1142960 REVERSE LENGTH=152
Medicago Medtr1g070450.1 293 96.7 98.0 | 40S ribosomal protein S15-4 | HC | chr1:31246169-31248565 | 20130731
Soybean Glyma07g39980.1 288 93.0 93.7  
LJGI gnl|LJGI|TC63172 904 100.0 100.0 homologue to UniRef100_A7NX09 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=2; core eudicotyledons|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1015870.1 length: 151 aa.
IPR002222 Ribosomal protein S19/S15
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
FPrintScan PR00975 RIBOSOMALS19 7.1e-13 84-103
104-116
116-131
HAMAP MF_00531 Ribosomal_S19 21.096 47-140
HMMPIR PIRSF002144 Ribosomal 3.5e-74 1-151
HMMPanther PTHR11880 RIBOSOMAL 2.7e-104 9-151
HMMPfam PF00203 Ribosomal_S19 1e-34 53-134
IPR005713 Ribosomal protein S19A/S15e
Molecular Function GO:0003735 structural constituent of ribosome    
Biological Process GO:0006412 translation    
Cellular Component GO:0015935 small ribosomal subunit    
HMMTigr TIGR01025 rpsS_arch: 8.6e-72 18-151
IPR020934 Ribosomal protein S19 conserved site
Molecular Function GO:0003723 RNA binding    
PatternScan PS00323 RIBOSOMAL_S19 NA 104-128
IPR023575 Ribosomal protein S19, superfamily
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Gene3D G3DSA:3.30.860.10 no description 1.4e-34 52-144
superfamily SSF54570 Ribosomal 7.3e-30 53-136
Wolf-PSORT
Lj5g3v1015870.1	cyto 12, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1015870.1