Miyakogusa Predicted Gene
- Lj5g3v1015530.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JF40_SOYBN |
194 |
78.9 |
89.5 |
(tr|I1JF40) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G06780.1 |
138 |
55.7 |
73.9 |
| Symbols: GAUT6 | galacturonosyltransferase 6 | chr1:2083689-2086853 FORWARD LENGTH=589 |
| Medicago |
Medtr1g070490.1 |
187 |
81.7 |
87.8 |
| glycosyltransferase family 8 protein | HC | chr1:31293246-31299960 | 20130731 |
| Soybean |
Glyma02g15990.1 |
194 |
78.9 |
89.5 |
|
| LJGI |
gnl|LJGI|TC76366 |
56.0 |
84.7 |
84.7 |
weakly similar to UniRef100_A7PUM3 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1015530.1 |
length: 145 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR32116 |
FAMILY |
2.3e-52 |
1-115 |
| HMMPanther |
PTHR32116:SF0 |
SUBFAMILY |
2.3e-52 |
1-115 |
- Wolf-PSORT
Lj5g3v1015530.1 chlo 5, mito 2, golg 2, nucl 1, plas 1, extr 1, vacu 1, E.R. 1, cyto_mito 1, nucl_plas 1, E.R._vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1015530.1 |
|