Miyakogusa Predicted Gene
- Lj5g3v1015180.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B7FMP7_MEDTR |
299 |
74.2 |
82.3 |
(tr|B7FMP7) Auxin-induced protein OS=Medicago truncatula GN=MTR_1g070830 PE=2 SV=1 |
| TAIR_pep |
AT5G43700.1 |
234 |
64.6 |
74.6 |
| Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional regulator family protein | chr5:17550465-17551206 FORWARD LENGTH=186 |
| Medicago |
Medtr1g070830.1 |
299 |
74.2 |
82.3 |
| auxin-responsive AUX/IAA family protein | HC | chr1:31369872-31371491 | 20130731 |
| Soybean |
Glyma02g16090.1 |
290 |
75.7 |
80.7 |
|
| LJGI |
gnl|LJGI|TC64632 |
1130 |
100.0 |
100.0 |
homologue to UniRef100_O24542 Cluster: Auxin-induced protein 22D; n=1; Vigna radiata var. radiata|Rep: Auxin-induced protein 22D - Phaseolus aureus (Mung bean) (Vigna radiata), partial (83%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1015180.1 |
length: 189 aa. |
| IPR003311 |
AUX/IAA protein |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005634 |
nucleus |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| HMMPfam |
PF02309 |
AUX_IAA |
6.5e-74 |
8-187 |
| IPR011525 |
Aux/IAA-ARF-dimerisation |
| Molecular Function |
GO:0046983 |
protein dimerization activity |
|
|
| ProfileScan |
PS50962 |
IAA_ARF |
29.616 |
94-181 |
| no_ID |
|
| HMMPanther |
PTHR31734 |
FAMILY |
1e-93 |
1-187 |
| Seg |
seg |
seg |
NA |
41-54 |
| superfamily |
SSF54277 |
CAD |
1.5e-22 |
81-179 |
- Wolf-PSORT
Lj5g3v1015180.1 nucl 10, mito 2, extr 1, golg 1, chlo_mito 1, cyto_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1015180.1 |
|