Miyakogusa Predicted Gene

Lj5g3v1015130.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C0JP12_LOTJA 439 80.0 80.0 (tr|C0JP12) Putative basic helix-loop-helix protein BHLH4 OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT4G02590.2 291 56.5 64.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:1137968-1140306 REVERSE LENGTH=310
Medicago Medtr1g070870.1 398 73.5 75.6 | basic helix loop helix protein BHLH4 | HC | chr1:31384531-31380237 | 20130731
Soybean Glyma19g34360.1 372 68.1 72.9  
LJGI gnl|LJGI|TC72186 1707 100.0 100.0 homologue to UniRef100_A7PUK8 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (70%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1015130.1 length: 285 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 1.1e-13 131-188
HMMPfam PF00010 HLH 3.3e-07 134-178
HMMSmart SM00353 helix 1.2e-10 135-184
ProfileScan PS50888 BHLH 16.044 129-178
superfamily SSF47459 HLH, 3.7e-15 127-211
no_ID  
HMMPanther PTHR16223 FAMILY 1.4e-131 1-285
HMMPanther PTHR16223:SF1 SUBFAMILY 1.4e-131 1-285
Seg seg seg NA 105-127
136-152
209-216
Wolf-PSORT
Lj5g3v1015130.1	nucl 11, chlo 1, cyto 1, plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1015130.1