Miyakogusa Predicted Gene

Lj5g3v1014710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JF68_SOYBN 6306 85.9 89.9 (tr|I1JF68) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G03060.1 5139 70.0 80.6 | Symbols: SPI | Beige/BEACH domain ;WD domain, G-beta repeat protein | chr1:712971-726891 REVERSE LENGTH=3601
Medicago Medtr1g071260.1 6306 85.2 89.3 | beige/BEACH and WD40 domain protein | HC | chr1:31608148-31589045 | 20130731
Soybean Glyma02g16260.1 6207 86.1 90.1  
LJGI gnl|LJGI|FS358573 1403 100.0 100.0 similar to UniRef100_A7PUH7 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1014710.1 length: 3602 aa.
IPR000409 BEACH domain
method AccNumber shortName E-value location
Gene3D G3DSA:1.10.1540.10 no description 2.7e-129 2980-3264
HMMPfam PF02138 Beach 8.4e-107 2985-3264
HMMSmart SM01026 Beige/BEACH 1.4e-202 2984-3264
ProfileScan PS50197 BEACH 136.471 2972-3264
superfamily SSF81837 BEACH 1.9e-119 2958-3264
IPR001680 WD40 repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 1.8e-08 3348-3377
3396-3428
HMMSmart SM00320 WD40 0.75 3337-3378
3389-3428
3481-3518
3550-3589
ProfileScan PS50082 WD_REPEATS_2 13.182 3353-3379
3396-3437
IPR008985 Concanavalin A-like lectin/glucanases superfamily
superfamily SSF49899 Concanavalin 9.5e-11 1137-1285
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 1.2e-05 1133-1237
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 5.6e-37 3317-3599
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 0.0046 501-1016
148-338
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 15.267 3346-3437
superfamily SSF50978 WD40 2.1e-34 3307-3593
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 3415-3429
IPR023362 PH-BEACH domain
Gene3D G3DSA:2.30.29.40 no description 2.6e-14 2885-2946
no_ID  
HMMPanther PTHR13743 BEIGE/BEACH-RELATED 0 76-3596
HMMPanther PTHR13743:SF16 SUBFAMILY 0 76-3596
HMMPfam PF13385 Laminin_G_3 3.2e-07 1080-1263
Seg seg seg NA 19-39
43-58
70-87
100-111
459-475
579-591
996-1004
1168-1181
1634-1651
2092-2104
2239-2256
2749-2766
3527-3536
superfamily SSF50729 PH 1.2e-22 2784-2951
Wolf-PSORT
Lj5g3v1014710.1	nucl 7, cyto 3, vacu 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1014710.1