Miyakogusa Predicted Gene

Lj5g3v1003320.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1L865_SOYBN 1310 88.1 94.3 (tr|I1L865) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G03090.2 1059 73.6 84.0 | Symbols: MCCA | methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) | chr1:739715-743819 FORWARD LENGTH=734
Medicago Medtr1g071610.1 1288 88.5 93.7 | acetyl-CoA carboxylase, putative | HC | chr1:31783942-31793204 | 20130731
Soybean Glyma10g03440.1 1310 88.1 94.3  
LJGI gnl|LJGI|TC78972 1366 100.0 100.0 similar to UniRef100_Q42777 Cluster: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor; n=1; Glycine max|Rep: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor - Glycine max (Soybean), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1003320.1 length: 735 aa.
IPR000089 Biotin/lipoyl attachment
method AccNumber shortName E-value location
HMMPfam PF00364 Biotin_lipoyl 9.1e-14 666-731
ProfileScan PS50968 BIOTINYL_LIPOYL 12.638 665-732
IPR001882 Biotin-binding site
PatternScan PS00188 BIOTIN NA 689-706
IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain
Molecular Function GO:0005524 ATP binding    
HMMPfam PF02786 CPSase_L_D2 1.8e-75 150-358
PatternScan PS00866 CPSASE_1 NA 188-202
PatternScan PS00867 CPSASE_2 NA 322-329
IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00289 CPSase_L_chain 6.5e-41 37-145
IPR005482 Biotin carboxylase, C-terminal
Molecular Function GO:0016874 ligase activity    
HMMPfam PF02785 Biotin_carb_C 4e-35 372-478
HMMSmart SM00878 Biotin 1.8e-50 372-478
IPR011053 Single hybrid motif
superfamily SSF51230 Single 6.2e-18 650-733
IPR011054 Rudiment single hybrid motif
superfamily SSF51246 Rudiment 3.3e-42 367-483
IPR011761 ATP-grasp fold
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0046872 metal ion binding    
ProfileScan PS50975 ATP_GRASP 48.637 155-353
IPR011764 Biotin carboxylation domain
Molecular Function GO:0004075 biotin carboxylase activity    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016874 ligase activity    
ProfileScan PS50979 BC 56.430 36-482
IPR013815 ATP-grasp fold, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.1490.20 no description 7.4e-27 164-237
IPR013816 ATP-grasp fold, subdomain 2
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.470.20 no description 3.4e-104 238-482
IPR016185 Pre-ATP-grasp domain
Gene3D G3DSA:3.40.50.20 no description 1.6e-49 37-163
superfamily SSF52440 PreATP-grasp 4.6e-49 19-148
no_ID  
Gene3D G3DSA:2.40.50.100 no description 2.8e-18 665-732
HMMPanther PTHR18866 CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA 0 29-734
HMMPanther PTHR18866:SF18 METHYLCROTONOYL-COA 0 29-734
Seg seg seg NA 6-22
superfamily SSF56059 Glutathione 1.8e-70 118-395
Wolf-PSORT
Lj5g3v1003320.1	mito 12, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1003320.1