Miyakogusa Predicted Gene
- Lj5g3v1000960.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IDM5_MEDTR |
276 |
65.1 |
78.0 |
(tr|G7IDM5) Vicilin-like antimicrobial peptides 2-2 OS=Medicago truncatula GN=MTR_1g071710 PE=4 SV=1 |
| TAIR_pep |
AT3G22640.1 |
92.4 |
29.6 |
48.7 |
| Symbols: PAP85 | cupin family protein | chr3:8011902-8013883 REVERSE LENGTH=486 |
| Medicago |
Medtr1g071710.1 |
276 |
65.1 |
78.0 |
| sucrose-binding protein-like protein | HC | chr1:31853527-31851033 | 20130731 |
| Soybean |
Glyma02g16440.1 |
254 |
56.3 |
72.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1000960.2 |
length: 223 aa. |
| IPR006045 |
Cupin 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0045735 |
nutrient reservoir activity |
|
|
| HMMPfam |
PF00190 |
Cupin_1 |
1.5e-22 |
29-187 |
| HMMSmart |
SM00835 |
Cupin |
2.5e-40 |
29-195 |
| IPR011051 |
RmlC-like cupin domain |
| superfamily |
SSF51182 |
RmlC-like |
8.6e-37 |
14-208 |
| IPR014710 |
RmlC-like jelly roll fold |
| Gene3D |
G3DSA:2.60.120.10 |
no description |
2.5e-40 |
27-209 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
106-119 |
- Wolf-PSORT
Lj5g3v1000960.2 mito 8, chlo 4, cyto_mito 4, mito_plas 4
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1000960.2 |
|